PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC062834.10
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bHLH
Protein Properties Length: 177aa    MW: 20140.2 Da    PI: 10.1571
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC062834.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.95.1e-101565554
                  HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHH CS
           HLH  5 hnerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksL 54
                   + +E++RR r+N   ++L +l+P+   ++sk  ls  + L +A+ YI +L
  EcC062834.10 15 RKTVEKNRRIRMNILCSKLASLIPQHHITTSKElLSRQDRLDQATSYITQL 65
                  6789*********************667888888***************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088810.691065IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.0E-91269IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.63E-101378IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003530.00291671IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.6E-71665IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.24E-41869No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    Send to blast
MNKSTRTNQS LKVERKTVEK NRRIRMNILC SKLASLIPQH HITTSKELLS RQDRLDQATS  60
YITQLKERID GLKLRKEQAV LLSEGIDTSS SLTSSIDQKA KLGFVPPVFQ LRDHGLGLDV  120
ILISGRRKNF MLYEVIRILE EEGAEVVNAS FSVVGDKIFH TLHAQGTHYL ELFHRGC
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010039150.11e-110PREDICTED: transcription factor ORG2-like
TrEMBLA0A059A5A01e-110A0A059A5A0_EUCGR; Uncharacterized protein
STRINGPOPTR_0012s08050.15e-51(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM12782592
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.19e-26bHLH family protein